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  PERSONALS

 
Name:   Dr. Shaukat Iqbal Malik

  Address:   Mohammad Ali Jinnah University, Jinnah Avenue, Islamabad, Pk
  Phone:   92-51-111878787 Email:   drsimalik@jinnah.edu.pk
  Web Address:   None  
         
  AFFILIATIONS

 
Designation:  Associate Professor
  Department:  Bioinformatics
  Joining:  06-2007
  Organization :  Mohammad Ali Jinnah University, Jinnah Avenue, Islamabad, Pk  
 
  QUALIFICATIONS
  Degree Majors University / Institute
Postdoc Microarray Expression Analysis Lineberger Comprehensive Cancer Center, Biomedical Research Imaging Center University of North Carolina at Chapel Hill,450 West Drive, USA Chapel Hil
Postdoc 1s Human Chromosomal Analysis, Comet Assay NHEERL, Cancer Biology branch (Cytogenetics section) US Protection Agency RTP Complex, NC USA
Ph.D Biochemistry & Molecular Biology National and Kapodistrian University of Athens
M. Sc (Hon Genetics SAU, Pakistan
B. Sc (Hon Genetics UAF Faisalabad, Pakistan
     
  AWARDS
  Award Detail:
In 2007 HEC has awarded a Research Project under National Research Program for Universities entitled “Genotoxicity testing of pesticides, plant protection products by means of pre mature chromosome co
Postdoc fellowship has been awarded by Higher Education Commission, Islamabad, Pakistan for the period of 01 year (2007-2008).
Travel grants Awarded by HEC for presenting a paper “Performance indicators in higher education in “Malaysia, 2007 SAARC Chair has been awarded by Govt. of Pakistan 2006.
Travel grant Awarded by HEC for Presenting a paper in the “ Role of Polymorphic human glutathione S- transferease Theta (GSTT1) genotype in determining individual Sensitivity to SCEs, comparison, us
Best Faculty Performance Award Received from BUIETMS, Quetta, Pakistan, 2005.
Scholarship awarded for PhD European Union DAC program via Greek Ministry of Education and Religious Affairs
Scholarship awarded for B.Sc (Hons.) Govt. of Baluchistan 1984-1988
Scholarship awarded for M. Sc (Hons.) Govt. of Baluchistan - 1991-1993
Scholarship awarded by The Jackson Laboratory for 50th Annual Short Course on Medical and Experimental Mammalian Genetics. July, 19-31, 2009
Scholarship awarded by The Jackson Laboratory for 17th Annual Short Course on Experimental Models of Human Cancer August, 22-31, 2008
 
  TEACHING EXPERIENCE
  Designation From To University / Institution
  Postdoc Fellow 2007  2009 NHEERL, -US EPA RTP Complex, NC, United States
  Associate Professor 06-2007  to-date Mohammad Ali Jinnah University, Jinnah Avenue, Islamabad, Pk
  Associate Professor 09-2005  06-2007 BUITMS, Quetta
  Assistant Professor 09-2004  10-2005 BUITMS, Quetta
  Assistant Professor 06-1995  09-2004 BAC.Quetta
  Lecture 11-1989  06-1995 BAC Quetta
 
  MEMBERSHIP OF PROFESSIONAL BODIES
  Title Institution
  Member Member of International Center for Genetic Engineering and Biotechnology, Trieste, Italy
  Member National Testing Service (NTS) subject committee member
  Reviewer HEC research proposal reviewer
  supervisor HEC approved supervisor for PhD student supervision in Biological sciences
 
  RESEARCH AREA
  
  Extensive experience in Cytogenetics
  Tissue culture techniques, Environmental Mutagenesis, and various biochemical techniques for analysis of DNA damage
  Biological dosimetry
  In particular extensive experience in sister chromatid exchanges (SCEs) analysis chromosomal aberration analysis, lymphocyte culture and G band technique etc
  Premature Chromosome Condensation (PCC) Technique and DNA Isolation Process
  Having knowledgeable experience of gene screening by Electrophoresis and Polymerize Chine Reaction (PCR)
  Bioinformatics: Attended several International and National Workshops on Proteomics, Protein Bioinformatics .Genomics and Proteomics
 
  PUBLICATIONS
 
     1
Shagufta Kanwal[1], Sumaira Nishat[1], . Shaukat I Malik[1], Docking of Human Rhodopsin mutant (Gly90„³Asp) with -arrestin and cyanidin 3-rutinoside to cure Night blindness. Submitted MBC Bioinformatics (IF3.75)
 
     2
Andrew Kligerman, S. I Malik, James Campbell Cytogenetic Insights into DNA Damage and Repair of Lesion Induced by a Monomethylated Trivalent (MMAIII) Arsenical, “Environmental and Molecular Mutagenesis” 2009 IF 2.546
 
     3
Malik S I, Terzoudi GI, Pantelias GE. SCES analysis in G2 Lymphocytes prematurely condensed chromosomes after exposure to Atrazine: the non-dose-dependent increase in homologous recombination events does not support its genotoxic mode for action. Cytogenet Genome Res. 2004; 104(1-4):315-9. PubMed (IF 2.402)
 
     4
Terzoudi G.I, S. I .Malik, K. Magaritis, K. N. Manola G.E Pantelias and W. Makropolos A new Cytogenetics approach for the evaluation of mutagenic potential of Chemicals that Induce cell cycle arrest in G2 phase. Mutagenesis Vol.18 no 6pp1-5, 2003 PubMed (IF2.382)
 
     5
William. K Kauffman, S.I Malik, James Campbell To determine whether induction of C-Anaphase by Arsenic (MMA) is due to a defect in the spindle assembly checkpoint (submitted) Carcinogenesis (IF5.336)
 
     6
K.N. Manola, G. I. Terzoudi, C.E .Dardoufas, .Malik S. I and G. E. Pantelias Radio protected effect on Amifostine on cells from cancer phone patients and healthy individuals studied by the G2 and PCC assays. Int J Radiat Biol.Canada, 2003 Oct; 79(10):831-838. PubMed (IF2.31)
 
     7
Comparative Homology Modeling of Human Rhodopsin with several templates of Bovine Rhodopsin Submitted in Molecular Biology Reports 2010 (IF 1.75)
 
     8
Shaukat I. Malik, [2] Tahir Aqeel [3] G. Terzoudi* Study of Human glutathione S-transfrase Theta (GSTT1) gene from Genomic DNA and to check possible susceptibility of Carcinigenity link to the frequency of SCEs in Human. Submitted In Molecolar Biology Report (IF: 1.75)
 
     9
Participated in International training course of genetics held in Cairo from 2/4 to 15/6 1998 under “EICCA” in Egypt
 
     10
Attended 2nd International Training Course “BIOINFORMATICS” held in Nov. 2005 at University of Punjab, Lahore
 
     11
Participated in the on “Pre-18th National FAOMBM Satellite workshop & Symposium on Bioinformatics” held, 2005 at Center of Excellence in Molecular Biology UO P, Lahore.
 
     12
Attended an International Course “Chromosomal Instability” Nov. 2002 in ICGEB Trieste, Italy
 
     13
Participated in 4th International Theoretical and Participated Course in Molecular Genetic using fluorescent in -situ Hybridization (FISH) April 2003, in Sfax, Tunisia, Organized by ICGEB-ICRO-UNESCO-AUF
 
     14
Participated in 8th International Symposium of the ISSA section for research, “RISK ASSESSMENT”, which was held in Athens, Greece in May, 2003.
 
     15
Attended 2nd International Training Course “BIOINFORMATICS” 2005 at UOP, Lahore
 
     16
Participated in the on “Pre-18th National FAOMBM Satellite workshop & Symposium on Bioinformatics” held from 14th to 19th Nov. 2005 at Center of Excellence in Molecular Biology University of Punjab, Lahore
 
     17
Attended Bioinformatics workshop at University of Tehran, Iran in 2004 under the Auspicious of ICGEB, Italy
 
     18
Participated as resource person in National Conference on Biotechnology and Informatics in Pakistan
 
     19
Attended, NIBGE-FAO National Training workshop on Detection of Genetically Modified Organisms, 12-17, July .2005
 
     20
An oral Presentation of Scientific paper had delivered in 3rd International Conference of Biotechnology held from 14-19 Dec. 2005 at Jamshoro University, Pakistan .
 
     21
Attended, NIBGE-FAO National Training workshop on Detection of Genetically Modified Organisms, 12-17, July .2005
 
     22
Attended Bioinformatics workshop at University of Tehran, Iran form 4-10 September 2004 under the Auspicious of ICGEB, Italy
 
     23
Participated as resource person in an international Workshop organized by ICGEB “Application of Advanced Molecular Methods for Diagnosis of Human Genetic Diseases” 13-17 September, 2005 Tehran, Iran.
 
     24
Delivered a plenary lecture in first National workshop/ seminar on Techniques in Biotechnology organized by University of Baluchistan, Quetta 24-29 April 2006
 
     25
Presented a talk entitle “Role of Polymorphic human glutathione S- transferease Theta (GSTT1) genotype in determining individual sensitivity to SCEs, comparison, using Peripheral blood lymphocyte” in 1st International conference on Chemistry held Sherm-ul-sheikh, Egypt, held 07-11, September , 2006.
 
     26
Delivered an oral presentation about application Cytogenetics in the field of Bioinformatics during workshop on “Emerging topics in human functional genomics and proteomics”, 26-31 March, 2006 Antalya, Turkey, organized by ICGEB Trieste and Belkant University Ankara.
 
     27
Presented a talk entitled “Performance Indicators in Higher Education”2007 Asia Pacific Quality Network. Hosted by national Accreditation Board Malaysia , held in Putra World Trade Center, Kuala Lumpur, 04-07, February, 2007
 
     28
Participated an international workshop on Protein and Protein Bioinformatics, held from 13-17 July, 2007 at University of Limpopo, Petersburg, South Africa
 
     29
Presented a talk “Proteomics is an essential component of biological research” in the 1st Central and European Proteomics and 3rd Czech Proteomics Conference held in Top Hotel, Prague, Czech Republic, 29-31, October, 2007
 
     30
A talk delivered on Molecular techniques for the diagnosis of Genetic diseases by Karyotype, PCR, FISH, Real Time PCR and at PIMS, Islamabad, Pakistan .( Jan,2008).
 
     31
Participated and presented a talk on” Bioinformatics its Objectives & Future” in 2nd National Conference of Life Scientists, 30-31 January, 2008 B. Z. University, Multan, Pakistan.
 
     32
Attended 3rd Annual Duke Systems Biology Symposium, October, 2008, Durham, NC.
 
     33
Attended 17th Annual Short Course on Mouse Experimental Models of Human Cancer August 22-31, 2008 Jackson Laboratory, Bar Harbor, Maine, USA
 
     34
Fungtional and Promoter inrichment based analysis of biclustering algorithums using gene expression of Yeast; Nighat noreen,Nadia Kalsoom, Alberto De La Fuente , Sahar faza and Shaukat I Malik
 
     35
Attended 50th Annual Short Course on Medical and Experimental Mammalian Genetics August 22-31, 2008 Jackson Laboratory, Bar Harbor, Maine, USA
 
     36
S. I. Malik. International conference on Assessing Quality in Higher Education.11-13 December 2006 http://www.icaqhe2007.org.pk/index.html
 
     37
S. I. Malik The ICGEB’S 2004 workshop on “Application of Advanced Molecular Methods for the Diagnosis of Human Genetic Diseases” (September 13-17, 2004) at the National Institute for Genetic Engineering and Biotechnology (NIGEB).
 
     38
S. I. Malik. “Performance Indicators in Higher Education”2007 Asia Pacific Quality Network. Hosted by national Accreditation Board Malaysia , held in Putra World Trade Center, Kuala Lumpur, 04-07, February, 2007
 
     39
S. I. Malik.” Validity and Reliability in Quantitative Research” the same presented in “1st Multidisciplinary International Conference on Quantitative Research in Developing Countries”: Opportunities and Challenges, November 03-04 2006, organized by University of Karachi. Pakistan.
 
     40
Terzoudi G.I., S.I. Malik, K. Manola, G.E. Pantelias, W. Makropoulos (2003). A new cytogenetic method for the evaluation of mutagenic potential of chemicals that induce cell-cycle arrest in G2-phase. 8th International Symposium of the ISSA Research Section “Tools for the application of European Directives on health at the workplace. The example of chemical risk” Athens, Greece, 19-21 May 2003 PubMed)
 
     41
Malik S.I., G.I. Terzoudi. Margaritas, G.E. Pantelias, C.E. Vorgias, and W. Markopoulos (2003). Genotoxicity of Atrazine as determined using the analysis of sister chromatid exchanges directly in the G2-phase of peripheral blood lymphocytes. 8th International Symposium of the ISSA Research Section.” Tools for the application of European Directives on health at the workplace. The example of chemical risk” Athens, Greece, 19-21 May 2003 (PubMed)
 
     42
Shagufta Kanwal1, Sumaira Nishat1, S.I. Malik1 and M. Ismail2
 
     43
Terzoudi G.I, S.I Malik, K. Manola, G.E. Pantelias, W. Markopoulos A new Cytogenetic approach for genotoxicity assessment of chemical exposure even at toxic doses” Translated and Published in, English, German, French and Greek and Published in European Section of ISSA Research Section n 8th International symposium of the ISSA section for research, “Risk Assessment” May 2003. pp, 169-73 PubMed
 
     44
S.I. Malik, Terzoudi G. I, K. Magaritis, G.E Pantelias, C.E Vorgias, Markopoulos W Scientific work has been presented with the title of “Genotoxicity of Atrazine as determined using the analysis of sister chromatid exchanges directly in G2-phase of peripheral blood lymphocytes presented in 8th, International symposium and has been Published in European Section of ISSA Research Section” Risk Assessment” pp: 425-28 May 2003
 
     45
S.I. Malik, F. Shazia. “ Assessment of Teaching and Learning “ in 1st International Conference on Assessing Quality in Higher Education ,-11 December,2006 At Lahore ,Pakistan.(Published in ICAQHE,2006.(P-174-183).
 
     46
S. I .Malik, Terzoudi G. I and G.E .Pantelias Role of Polymorphic human glutathione S- transferease Theta (GSTT1) genotype in determining individual sensitivity to SCEs, comparison, using Peripheral blood lymphocytes Int. J. of Chem. Egypt S.I.malik & S.Afridi
 
     47
Role of Bioinformatics in the field of Molecular biology .J. App .Emg .Sc Vol.2, 2005. S.I. Malik
 
     48
An oral Presentation Scientific paper on “Ethics, Stem Cell Research Tissue Transplantation” has been delivered in International Congress of Bioethics 2005 Tehran, Iran. Published in Bioethics proceeding (P- 281-89)
 
     49
S.I. Malik”Validity and Reliability in Quantitative Research” the same presented in “1st Multidisciplinary International Conference on Quantitative Research in Developing Countries”: Opportunities and Challenges, November 03-04 2006, organized by University of Karachi S.I. Malik
 
     50
” Molecular Cytogenetics Technique for the diagnosis of Cancer and Genetic disorders by Karyotype.” in 5th International Biennial Conference of Pakistan Society for Microbiology held, April,10-15, 2005, PC. Karachi, Pakistan.
 

 

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