| PERSONALS |
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Name: |
Dr. Shaukat Iqbal Malik
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Address: |
Mohammad Ali Jinnah University, Jinnah Avenue, Islamabad, Pk |
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Phone: |
92-51-111878787 |
Email: |
drsimalik@jinnah.edu.pk |
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Web Address: |
None |
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| AFFILIATIONS |
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Designation: |
Associate Professor |
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Department: |
Bioinformatics |
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Joining: |
06-2007 |
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Organization : |
Mohammad Ali Jinnah University, Jinnah Avenue, Islamabad, Pk |
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| QUALIFICATIONS |
| Degree |
Majors |
University / Institute |
| Postdoc |
Microarray Expression Analysis |
Lineberger Comprehensive Cancer Center, Biomedical Research Imaging Center University of North Carolina at Chapel Hill,450 West Drive, USA Chapel Hil |
| Postdoc 1s |
Human Chromosomal Analysis, Comet Assay |
NHEERL, Cancer Biology branch (Cytogenetics section) US Protection Agency RTP Complex, NC USA |
| Ph.D |
Biochemistry & Molecular Biology |
National and Kapodistrian University of Athens |
| M. Sc (Hon |
Genetics |
SAU, Pakistan |
| B. Sc (Hon |
Genetics |
UAF Faisalabad, Pakistan |
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| AWARDS |
| Award Detail: |
| In 2007 HEC has awarded a Research Project under National Research Program for Universities entitled “Genotoxicity testing of pesticides, plant protection products by means of pre mature chromosome co |
| Postdoc fellowship has been awarded by Higher Education Commission, Islamabad, Pakistan for the period of 01 year (2007-2008). |
| Travel grants Awarded by HEC for presenting a paper “Performance indicators in higher education in “Malaysia, 2007 SAARC Chair has been awarded by Govt. of Pakistan 2006. |
| Travel grant Awarded by HEC for Presenting a paper in the “ Role of Polymorphic human glutathione S- transferease Theta (GSTT1) genotype in determining individual Sensitivity to SCEs, comparison, us |
| Best Faculty Performance Award Received from BUIETMS, Quetta, Pakistan, 2005. |
| Scholarship awarded for PhD European Union DAC program via Greek Ministry of Education and Religious Affairs |
| Scholarship awarded for B.Sc (Hons.) Govt. of Baluchistan 1984-1988 |
| Scholarship awarded for M. Sc (Hons.) Govt. of Baluchistan - 1991-1993 |
| Scholarship awarded by The Jackson Laboratory for 50th Annual Short Course on Medical and Experimental Mammalian Genetics. July, 19-31, 2009 |
| Scholarship awarded by The Jackson Laboratory for 17th Annual Short Course on Experimental Models of Human Cancer August, 22-31, 2008 |
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| TEACHING EXPERIENCE |
| Designation |
From |
To |
University / Institution |
| Postdoc Fellow |
2007 |
2009 |
NHEERL, -US EPA RTP Complex, NC, United States |
| Associate Professor |
06-2007 |
to-date |
Mohammad Ali Jinnah University, Jinnah Avenue, Islamabad, Pk |
| Associate Professor |
09-2005 |
06-2007 |
BUITMS, Quetta |
| Assistant Professor |
09-2004 |
10-2005 |
BUITMS, Quetta |
| Assistant Professor |
06-1995 |
09-2004 |
BAC.Quetta |
| Lecture |
11-1989 |
06-1995 |
BAC Quetta |
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| MEMBERSHIP OF PROFESSIONAL BODIES |
| Title |
Institution |
| Member |
Member of International Center for Genetic Engineering and Biotechnology, Trieste, Italy |
| Member |
National Testing Service (NTS) subject committee member |
| Reviewer |
HEC research proposal reviewer |
| supervisor |
HEC approved supervisor for PhD student supervision in Biological sciences |
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| RESEARCH AREA |
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| Extensive experience in Cytogenetics |
| Tissue culture techniques, Environmental Mutagenesis, and various biochemical techniques for analysis of DNA damage |
| Biological dosimetry |
| In particular extensive experience in sister chromatid exchanges (SCEs) analysis chromosomal aberration analysis, lymphocyte culture and G band technique etc |
| Premature Chromosome Condensation (PCC) Technique and DNA Isolation Process |
| Having knowledgeable experience of gene screening by Electrophoresis and Polymerize Chine Reaction (PCR) |
| Bioinformatics: Attended several International and National Workshops on Proteomics, Protein Bioinformatics .Genomics and Proteomics |
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| PUBLICATIONS |
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1 |
Shagufta Kanwal[1], Sumaira Nishat[1], . Shaukat I Malik[1], Docking of Human Rhodopsin
mutant (Gly90„³Asp) with -arrestin and cyanidin 3-rutinoside to cure Night blindness.
Submitted MBC Bioinformatics (IF3.75) |
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Andrew Kligerman, S. I Malik, James Campbell Cytogenetic Insights into DNA Damage and Repair
of Lesion Induced by a Monomethylated Trivalent (MMAIII) Arsenical, “Environmental and
Molecular Mutagenesis” 2009 IF 2.546 |
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3 |
Malik S I, Terzoudi GI, Pantelias GE. SCES analysis in G2 Lymphocytes prematurely condensed
chromosomes after exposure to Atrazine: the non-dose-dependent increase in homologous
recombination events does not support its genotoxic mode for action. Cytogenet Genome Res.
2004; 104(1-4):315-9. PubMed (IF 2.402) |
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4 |
Terzoudi G.I, S. I .Malik, K. Magaritis, K. N. Manola G.E Pantelias and W. Makropolos A new
Cytogenetics approach for the evaluation of mutagenic potential of Chemicals that Induce
cell cycle arrest in G2 phase. Mutagenesis Vol.18 no 6pp1-5, 2003 PubMed (IF2.382) |
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5 |
William. K Kauffman, S.I Malik, James Campbell To determine whether induction of C-Anaphase
by Arsenic (MMA) is due to a defect in the spindle assembly checkpoint (submitted)
Carcinogenesis (IF5.336) |
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6 |
K.N. Manola, G. I. Terzoudi, C.E .Dardoufas, .Malik S. I and G. E. Pantelias Radio protected
effect on Amifostine on cells from cancer phone patients and healthy individuals studied by
the G2 and PCC assays. Int J Radiat Biol.Canada, 2003 Oct; 79(10):831-838. PubMed (IF2.31) |
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7 |
Comparative Homology Modeling of Human Rhodopsin with several templates of Bovine Rhodopsin
Submitted in Molecular Biology Reports 2010 (IF 1.75) |
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8 |
Shaukat I. Malik, [2] Tahir Aqeel [3] G. Terzoudi* Study of Human glutathione S-transfrase
Theta (GSTT1) gene from Genomic DNA and to check possible susceptibility of Carcinigenity
link to the frequency of SCEs in Human. Submitted In Molecolar Biology Report (IF: 1.75) |
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9 |
Participated in International training course of genetics held in Cairo from 2/4 to 15/6 1998 under “EICCA” in Egypt |
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10 |
Attended 2nd International Training Course “BIOINFORMATICS” held in Nov. 2005 at University of Punjab, Lahore |
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11 |
Participated in the on “Pre-18th National FAOMBM Satellite workshop & Symposium on Bioinformatics” held, 2005 at Center of Excellence in Molecular Biology UO P, Lahore. |
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12 |
Attended an International Course “Chromosomal Instability” Nov. 2002 in ICGEB Trieste, Italy |
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13 |
Participated in 4th International Theoretical and Participated Course in Molecular Genetic using fluorescent in -situ Hybridization (FISH) April 2003, in Sfax, Tunisia, Organized by ICGEB-ICRO-UNESCO-AUF |
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14 |
Participated in 8th International Symposium of the ISSA section for research, “RISK ASSESSMENT”, which was held in Athens, Greece in May, 2003. |
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15 |
Attended 2nd International Training Course “BIOINFORMATICS” 2005 at UOP, Lahore |
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16 |
Participated in the on “Pre-18th National FAOMBM Satellite workshop & Symposium on Bioinformatics” held from 14th to 19th Nov. 2005 at Center of Excellence in Molecular Biology University of Punjab, Lahore |
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17 |
Attended Bioinformatics workshop at University of Tehran, Iran in 2004 under the Auspicious of ICGEB, Italy |
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18 |
Participated as resource person in National Conference on Biotechnology and Informatics in Pakistan |
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19 |
Attended, NIBGE-FAO National Training workshop on Detection of Genetically Modified Organisms, 12-17, July .2005 |
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20 |
An oral Presentation of Scientific paper had delivered in 3rd International Conference of Biotechnology held from 14-19 Dec. 2005 at Jamshoro University, Pakistan . |
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21 |
Attended, NIBGE-FAO National Training workshop on Detection of Genetically Modified Organisms, 12-17, July .2005 |
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22 |
Attended Bioinformatics workshop at University of Tehran, Iran form 4-10 September 2004 under the Auspicious of ICGEB, Italy |
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23 |
Participated as resource person in an international Workshop organized by ICGEB “Application of Advanced Molecular Methods for Diagnosis of Human Genetic Diseases” 13-17 September, 2005 Tehran, Iran. |
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24 |
Delivered a plenary lecture in first National workshop/ seminar on Techniques in Biotechnology organized by University of Baluchistan, Quetta 24-29 April 2006 |
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25 |
Presented a talk entitle “Role of Polymorphic human glutathione S- transferease Theta (GSTT1) genotype in determining individual sensitivity to SCEs, comparison, using Peripheral blood lymphocyte” in 1st International conference on Chemistry held Sherm-ul-sheikh, Egypt, held 07-11, September , 2006. |
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26 |
Delivered an oral presentation about application Cytogenetics in the field of Bioinformatics during workshop on “Emerging topics in human functional genomics and proteomics”, 26-31 March, 2006 Antalya, Turkey, organized by ICGEB Trieste and Belkant University Ankara. |
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27 |
Presented a talk entitled “Performance Indicators in Higher Education”2007 Asia Pacific Quality Network. Hosted by national Accreditation Board Malaysia , held in Putra World Trade Center, Kuala Lumpur, 04-07, February, 2007 |
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28 |
Participated an international workshop on Protein and Protein Bioinformatics, held from 13-17 July, 2007 at University of Limpopo, Petersburg, South Africa |
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29 |
Presented a talk “Proteomics is an essential component of biological research” in the 1st Central and European Proteomics and 3rd Czech Proteomics Conference held in Top Hotel, Prague, Czech Republic, 29-31, October, 2007 |
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30 |
A talk delivered on Molecular techniques for the diagnosis of Genetic diseases by Karyotype, PCR, FISH, Real Time PCR and at PIMS, Islamabad, Pakistan .( Jan,2008). |
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31 |
Participated and presented a talk on” Bioinformatics its Objectives & Future” in 2nd National Conference of Life Scientists, 30-31 January, 2008 B. Z. University, Multan, Pakistan. |
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32 |
Attended 3rd Annual Duke Systems Biology Symposium, October, 2008, Durham, NC. |
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33 |
Attended 17th Annual Short Course on Mouse Experimental Models of Human Cancer
August 22-31, 2008 Jackson Laboratory, Bar Harbor, Maine, USA
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34 |
Fungtional and Promoter inrichment based analysis of biclustering algorithums using gene expression of Yeast; Nighat noreen,Nadia Kalsoom, Alberto De La Fuente , Sahar faza and Shaukat I Malik |
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35 |
Attended 50th Annual Short Course on Medical and Experimental Mammalian Genetics
August 22-31, 2008 Jackson Laboratory, Bar Harbor, Maine, USA
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36 |
S. I. Malik. International conference on Assessing Quality in Higher Education.11-13 December 2006 http://www.icaqhe2007.org.pk/index.html |
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37 |
S. I. Malik The ICGEB’S 2004 workshop on “Application of Advanced Molecular Methods for the Diagnosis of Human Genetic Diseases” (September 13-17, 2004) at the National Institute for Genetic Engineering and Biotechnology (NIGEB). |
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38 |
S. I. Malik. “Performance Indicators in Higher Education”2007 Asia Pacific Quality Network. Hosted by national Accreditation Board Malaysia , held in Putra World Trade Center, Kuala Lumpur, 04-07, February, 2007 |
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39 |
S. I. Malik.” Validity and Reliability in Quantitative Research” the same presented in “1st Multidisciplinary International Conference on Quantitative Research in Developing Countries”: Opportunities and Challenges, November 03-04 2006, organized by University of Karachi. Pakistan. |
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40 |
Terzoudi G.I., S.I. Malik, K. Manola, G.E. Pantelias, W. Makropoulos (2003). A new cytogenetic method for the evaluation of mutagenic potential of chemicals that induce cell-cycle arrest in G2-phase. 8th International Symposium of the ISSA Research Section “Tools for the application of European Directives on health at the workplace. The example of chemical risk” Athens, Greece, 19-21 May 2003 PubMed) |
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41 |
Malik S.I., G.I. Terzoudi. Margaritas, G.E. Pantelias, C.E. Vorgias, and W. Markopoulos (2003). Genotoxicity of Atrazine as determined using the analysis of sister chromatid exchanges directly in the G2-phase of peripheral blood lymphocytes. 8th International Symposium of the ISSA Research Section.” Tools for the application of European Directives on health at the workplace. The example of chemical risk” Athens, Greece, 19-21 May 2003 (PubMed) |
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42 |
Shagufta Kanwal1, Sumaira Nishat1, S.I. Malik1 and M. Ismail2 |
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43 |
Terzoudi G.I, S.I Malik, K. Manola, G.E. Pantelias, W. Markopoulos
A new Cytogenetic approach for genotoxicity assessment of chemical exposure even at toxic doses” Translated and Published in, English, German, French and Greek and Published in European Section of ISSA Research Section n 8th International symposium of the ISSA section for research, “Risk Assessment” May 2003. pp, 169-73 PubMed |
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44 |
S.I. Malik, Terzoudi G. I, K. Magaritis, G.E Pantelias, C.E Vorgias, Markopoulos W
Scientific work has been presented with the title of “Genotoxicity of Atrazine as determined using the analysis of sister chromatid exchanges directly in G2-phase of peripheral blood lymphocytes presented in 8th, International symposium and has been Published in European Section of ISSA Research Section” Risk Assessment” pp: 425-28 May 2003
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45 |
S.I. Malik, F. Shazia.
“ Assessment of Teaching and Learning “ in 1st International Conference on Assessing Quality in Higher Education ,-11 December,2006 At Lahore ,Pakistan.(Published in ICAQHE,2006.(P-174-183). |
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46 |
S. I .Malik, Terzoudi G. I and G.E .Pantelias
Role of Polymorphic human glutathione S- transferease Theta (GSTT1) genotype in determining individual sensitivity to SCEs, comparison, using Peripheral blood lymphocytes Int. J. of Chem. Egypt
S.I.malik & S.Afridi
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47 |
Role of Bioinformatics in the field of Molecular biology .J. App .Emg .Sc Vol.2, 2005.
S.I. Malik |
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48 |
An oral Presentation Scientific paper on “Ethics, Stem Cell Research Tissue Transplantation” has been delivered in International Congress of Bioethics 2005 Tehran, Iran. Published in Bioethics proceeding (P- 281-89) |
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49 |
S.I. Malik”Validity and Reliability in Quantitative Research” the same presented in “1st Multidisciplinary International Conference on Quantitative Research in Developing Countries”: Opportunities and Challenges, November 03-04 2006, organized by University of Karachi
S.I. Malik |
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50 |
” Molecular Cytogenetics Technique for the diagnosis of Cancer and Genetic disorders by Karyotype.” in 5th International Biennial Conference of Pakistan Society for Microbiology held, April,10-15, 2005, PC. Karachi, Pakistan. |
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